Fibre Bundle Simulator

Allows image acquisition through a fibre bundle to be simulated.

Fibre Bundle Simulator (Matlab) allows image acquisition through a fibre bundle to be simulated. The simulation does not model multimodal behaviour of the fibre cores, instead each core is modelled as a 2D intensity function such as a circle or Gaussian. The fibre bundle parameters are defined using make_bundle and the distal object is sampled using sample_with_bundle. An image of the proximal face of the bundle is then obtained using project_cores. Alternatively, to quickly create an image, generate_bundle_image performs both of these functions.