MEAnalyzer

Anakyze spike trains exported from multi-electrode arrays

https://github.com/RDastgh1/MEAnalyzer

Version 2023.01.16 (64.1 MB)
782 Downloads
(1)
29 Feb 2024

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Analyze spike train data exported from multi-electrode array recordings with advanced visualizations. Matlab not required.
This stand-alone tool gives you the ability to:
Load spike trains from a variety of electrode layouts
Select electrodes from a graphical display
Crop time segments
Calculate electrode-specific metrics for spike activity
Plot and export raster plots in publication-ready format
Plot plate-wide activity with a bin size of your choosing
Calcualte bursts based on your own burst definition
Calculate periodic intervals for plate-wide activity
Calculate and visualize network correlation activity
Export 3D visualizations and videos
All parameters are adjustable

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Cite As

Raha Dastgheyb (2026). MEAnalyzer (https://github.com/RDastgh1/MEAnalyzer), GitHub. Retrieved .

Dastgheyb, Raha M., et al. “MEAnalyzer – a Spike Train Analysis Tool for Multi Electrode Arrays.” Neuroinformatics, Springer Science and Business Media LLC, July 2019, doi:10.1007/s12021-019-09431-0.

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General Information

MATLAB Release Compatibility

  • Compatible with any release

Platform Compatibility

  • Windows
  • macOS
  • Linux
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Versions that use the GitHub default branch cannot be downloaded

Version Published Release Notes
2023.01.16

Fixed bug in loading csvs
5.0

The newest update includes a macOS version and fixes bugs with the 120 electrode layout.

4.0

Methods Published in Neuroinformatics: https://www.ncbi.nlm.nih.gov/pubmed/31273627
3.0

- added support for more electrode layouts
- added ability to load csv spike trains with no layout associated
- added more functionality for exporting figures in publication-ready format
- added more functionality for voltage visualizations

1.1.02

Fixed bug when exporting data
1.1.0

Now reads files converted with MCS experimenter and allows for different electrode layouts
1.0.0

To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.