mdhumphries/NeuralE​nsembleAnalysis

Version 1.0.0.0 (19.8 MB) by mdhumphries
MATLAB toolbox for analysing neural ensembles
0.0
(0)
74 Downloads
Updated 2 Sep 2016
View License on GitHub

So you've found some ensembles of neurons (or ``cell assemblies") in your population recording data - now what? This toolbox tackles this problem by laying out a set of tools for analysing neural ensembles.
It contains a collection of scripts and functions for analysing ensembles assuming:
(1) you've got a clustering of your spike-train data into ensembles (as might be obtained by: https://github.com/mdhumphries/SpikeTrainCommunitiesToolBox)
(2) you've got your spike-trains in some time-series format (i.e. either binned or "spike-density" - convolved each spike with a window function) (as might be obtained by: https://github.com/mdhumphries/SpikeTrainCommunitiesToolBox)

The focus is on classifying ensembles: this allows us to then go back to each recording and start to decompose the dynamical systems captured within

Full details are in Bruno, Frost & Humphries (2015, Neuron)

Cite As

mdhumphries (2026). mdhumphries/NeuralEnsembleAnalysis (https://github.com/mdhumphries/NeuralEnsembleAnalysis), GitHub. Retrieved .

MATLAB Release Compatibility
Created with R2012b
Compatible with any release
Platform Compatibility
Windows macOS Linux
Tags Add Tags

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

Functions

TestData

Versions that use the GitHub default branch cannot be downloaded

Version Published Release Notes
1.0.0.0

To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.