MI-SIM/MI_SIM_final

Version 2.5.0.0 (7.68 MB) by Matthew Wade

A MATLAB Package for the Numerical Analysis of Ecological Motifs

329 Downloads

Updated 29 Apr 2021

View License on GitHub

Mathematical analysis software for microbial interactions

Matthew Wade (2026). MI-SIM/MI_SIM_final (https://github.com/MI-SIM/MI_SIM_final), GitHub. Retrieved January 14, 2026.

Created with R2016b

Compatible with any release

Windows macOS Linux

Versions that use the GitHub default branch cannot be downloaded

Version	Published	Release Notes
2.5.0.0	29 Apr 2021	Fixed minor bugs. Included selection of units option.
2.1.0.0	12 Oct 2016	Bug fixes. Created generic version of Phase Portrait algorithm.
2.0.0.0	23 Mar 2016	Version 2.0 includes a thermodynamic calculator to be used with syntrophic and three-species growth functions. It enables thermodynamic inhibition to be included instead of classical kinetics based inhibition functions.
1.3.0.0	2 Mar 2016	Added Contois, Moser, Tessier and Andrews growth functions and redeveloped associated code (for extracting Mupad solutions). Updated screenshot
1.2.0.0	25 Feb 2016	Complete recoding of the reporting function using append_pdfs functionality: http://uk.mathworks.com/matlabcentral/fileexchange/31215-append-pdfs Added archiving and delete reports functions
1.1.0.0	24 Feb 2016	Fixed minor bugs. Included functionality for integration of growth functions into GUI. Included functionality for start-up of GUI with user-specified motif and growth function.
1.0.0.0	20 Feb 2016	Changed title to "MI-SIM"

To view or report issues in this GitHub add-on, visit the GitHub Repository.