SSIT

Version 1.0.3.0 (142 MB) by Brian Munsky
Stochastic System Identification Toolkit (SSIT) to model, analyze and design single-cell experiments
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38 Downloads
Updated 23 Oct 2023
View License on GitHub

Cite As

H. D. Vo, J. Cook, E. Ron, B. Munsky, 2023, Stochastic System Identification Toolbox, v1.0.0, https://doi.org/10.5281/zenodo.10023437

MATLAB Release Compatibility
Created with R2023b
Compatible with any release
Platform Compatibility
Windows macOS Linux
Tags Add Tags

CommandLine

CommandLine/DavidKing

CommandLine/Dmitri

CommandLine/Josh

CommandLine/Vo_et_al_2023

CommandLine/Vo_et_al_2023/Other_Useful_Functions

EricModel

ExampleData

Examples

Models/Hog1_induced_gene_expression

Models/bursting_gene_expression

Models/gene_expression

SBML_test_cases/00001

SBML_test_cases/00002

SBML_test_cases/00003

SBML_test_cases/00004

SBML_test_cases/00005

SBML_test_cases/00006

SBML_test_cases/00007

SBML_test_cases/00008

SBML_test_cases/00009

SBML_test_cases/00010

SBML_test_cases/00011

SBML_test_cases/00012

SBML_test_cases/00013

SBML_test_cases/00014

SBML_test_cases/00015

SBML_test_cases/00016

SBML_test_cases/00017

SBML_test_cases/00018

SBML_test_cases/00019

SBML_test_cases/00020

SBML_test_cases/00021

SBML_test_cases/00022

SBML_test_cases/00029

SBML_test_cases/00030

SBML_test_cases/00031

SBML_test_cases/00032

SBML_test_cases/00033

SBML_test_cases/00038

src/+ssit/+fim

src/+ssit/+fsp

src/+ssit/+fsp_model_reduction

src/+ssit/+fsp_ode_solvers

src/+ssit/+fsp_ode_solvers/@Expokit

src/+ssit/+fsp_ode_solvers/@ExpokitPiecewise

src/+ssit/+fsp_ode_solvers/@MexSundials

src/+ssit/+fsp_ode_solvers/@OdeSolver

src/+ssit/+fsp_ode_solvers/@OdeSuite

src/+ssit/+moments

src/+ssit/+parest

src/+ssit/+pdo

src/+ssit/+pdo/@AbstractDistortionOperator

src/+ssit/+pdo/@TensorProductDistortionOperator

src/+ssit/+sensitivity

src/+ssit/+ssa

src/+ssit/@FiniteStateSet

src/+ssit/@FspMatrix

src/+ssit/@FspMatrixTerm

src/+ssit/@FspVector

src/+ssit/@Propensity

src/+ssit/@SrnModel

src/gui

src/gui/data_loading

src/gui/fim

src/gui/fsp

src/gui/model

src/gui/moments

src/gui/ode

src/gui/sensitivity

src/gui/ssa

src/gui/update

src/gui/visual

src/tensor_toolbox-v3.2.1

src/tensor_toolbox-v3.2.1/@ktensor

src/tensor_toolbox-v3.2.1/@sptenmat

src/tensor_toolbox-v3.2.1/@sptensor

src/tensor_toolbox-v3.2.1/@sptensor/private

src/tensor_toolbox-v3.2.1/@sumtensor

src/tensor_toolbox-v3.2.1/@symktensor

src/tensor_toolbox-v3.2.1/@symtensor

src/tensor_toolbox-v3.2.1/@symtensor/private

src/tensor_toolbox-v3.2.1/@tenmat

src/tensor_toolbox-v3.2.1/@tensor

src/tensor_toolbox-v3.2.1/@ttensor

src/tensor_toolbox-v3.2.1/maintenance

src/tensor_toolbox-v3.2.1/tests

tests

tests/SBML_test_cases/00001

tests/SBML_test_cases/00002

tests/SBML_test_cases/00003

tests/SBML_test_cases/00004

tests/SBML_test_cases/00005

tests/SBML_test_cases/00006

tests/SBML_test_cases/00007

tests/SBML_test_cases/00008

tests/SBML_test_cases/00009

tests/SBML_test_cases/00010

tests/SBML_test_cases/00011

tests/SBML_test_cases/00012

tests/SBML_test_cases/00013

tests/SBML_test_cases/00014

tests/SBML_test_cases/00015

tests/SBML_test_cases/00016

tests/SBML_test_cases/00017

tests/SBML_test_cases/00018

tests/SBML_test_cases/00019

tests/SBML_test_cases/00020

tests/SBML_test_cases/01117

tests/archived

Examples

Version Published Release Notes
1.0.3.0

See release notes for this release on GitHub: https://github.com/MunskyGroup/SSIT/releases/tag/v1.0.3
To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.