Are matlab images compatible to 3D slicer?

5 views (last 30 days)
My problem : I have sequence of binary images(2D) and i wanted to import these images in to 3D slicer. I had a problem in constructing 3D model out of these images. I tried converting these images into dicom format and then do it in slicer. But still there are some errors in slicer. I thought if some dicominfo like(SliceLocation) is given to the images, then it may work. May i know how to give the dicominfo to the images that i created in matlab. or any other solution for my problem.

Accepted Answer

Andras
Andras on 16 Jun 2013
Create a 3D array from the sequence of 2D slices and save into a 3DSlicer-compatible file format. You can save it into MHA format with the mha_write_volume function available at: https://subversion.assembla.com/svn/slicerrt/trunk/SlicerRt/sandbox/SlicerMatlabBridge/MetaImageIO/

More Answers (0)

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!