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BrainStat

version 0.2.7 (2.32 MB) by Reinder Vos de Wael
A statistics toolbox for neuroimaging.

58 Downloads

Updated 30 Sep 2021

From GitHub

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BrainStat : A toolbox for statistical analysis of neuroimaging data

https://readthedocs.org/projects/brainstat/badge/?version=master&style=plastic

Welcome to BrainStat's documentation!

BrainStat is a toolbox for the statistical analysis and context decoding of neuroimaging data. It implements both univariate and multivariate linear models and interfaces with the BigBrain Atlas, Allen Human Brain Atlas and Nimare databases. BrainStat flexibly handles common surface, volume, and parcel level data formats, and provides a series of interactive visualization functions. The toolbox has been implemented in both Python and MATLAB, the two most widely adopted programming languages in the neuroimaging and neuroinformatics communities. It is openly available, and documented here.

https://github.com/MICA-LAB/BrainStat/blob/master/docs/figures/brainstat_logo_bw.png?raw=true

Developers

  • Reinder Vos de Wael - MICA Lab, Montreal Neurological Institute
  • Şeyma Bayrak - Max Planck Institute for Human Cognitive and Brain Sciences
  • Oualid Benkarim - MICA Lab, Montreal Neurological Institute
  • Sara Lariviere - MICA Lab, Montreal Neurological Institute
  • Raul Cruces - MICA Lab, Montreal Neurological Institute
  • Peer Herholz - Montreal Neurological Institute
  • Seok-Jun Hong - Sungkyunkwan University
  • Sofie Valk - Max Planck Institute for Human Cognitive and Brain Sciences
  • Boris Bernhardt - Montreal Neurological Institute

License

The BrainStat source code is available under the BSD (3-Clause) license.

Support

If you have problems installing the software or questions about usage and documentation, or something else related to BrainStat, you can post to the Issues section of our repository.

MATLAB Release Compatibility
Created with R2021a
Compatible with R2019b and later releases
Platform Compatibility
Windows macOS Linux

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

+brainstat_utils

+brainstat_utils/+validators

context

context/+context_utils

datasets

datasets/+dataset_utils

io

io/+io_utils

io/+io_utils/+cifti_matlab

io/+io_utils/+cifti_matlab/private

io/+io_utils/+freesurfer

io/+io_utils/+nifti_toolbox

io/@xmltree

io/@xmltree/private

mesh

plotting

plotting/@plot_hemispheres

plotting/@plot_hemispheres/private

plotting/volume_viewer/@volume_viewer

plotting/volume_viewer/@volume_viewer/private

stats

stats/@FixedEffect

stats/@MixedEffect

stats/@SLM

tests/@test_datasets

tests/@test_precomputed

tests/@test_term_random_overloads

tests/@test_utils

To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.