Mid-Space-Independent and IDIR Deformable Image Registration

Version 2.0 (24.2 KB) by Iman Aganj
2D and 3D deformable image registration using the mid-space-independent (MSI) and intermediate deformable image registration (IDIR) methods.
3.0
(2)
813 Downloads
Updated 6 Feb 2023

View License

These are codes for 2D and 3D deformable image registration, using the mid-space-independent (MSI; Aganj et al, NeuroImage 2017) and the intermediate deformable image registration (IDIR; Aganj & Fischl, ISBI 2023) approaches.
See EXAMPLE_MSI.m and EXAMPLE_IDIR.m for short tutorials. If available, GPUs can be used to speed up the registration.

Cite As

Iman Aganj (2024). Mid-Space-Independent and IDIR Deformable Image Registration (https://www.mathworks.com/matlabcentral/fileexchange/61392-mid-space-independent-and-idir-deformable-image-registration), MATLAB Central File Exchange. Retrieved .

I. Aganj, J. E. Iglesias, M. Reuter, M. R. Sabuncu, and B. Fischl, "Mid-space-independent deformable image registration," NeuroImage, vol. 152, pp. 158-170, 2017. http://doi.org/10.1016/j.neuroimage.2017.02.055

I. Aganj and B. Fischl, "Intermediate deformable image registration via windowed cross-correlation," in Proc. IEEE International Symposium on Biomedical Imaging, pp. 1-5, Cartagena de Indias, Colombia, 2023.

MATLAB Release Compatibility
Created with R2022b
Compatible with any release
Platform Compatibility
Windows macOS Linux
Categories
Find more on MRI in Help Center and MATLAB Answers

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

Version Published Release Notes
2.0

Intermediate deformable image registration (IDIR; Aganj & Fischl, ISBI 2023) has been added. See EXAMPLE_IDIR.
1.2.0.1

Minor update.
1.2.0.0

A compilable command-line interface (MSI_CLI) has been added.
1.1.0.0

Minor edits.
1.0.0.0