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STAPLE(D)

version 1.0.1.0 (3.88 KB) by adhusch
Implementation of the STAPLE algorithm for binary segmentations

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Updated 10 May 2016

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A vectorized implementation of the STAPLE algorithm (Warfield et al., 2004) for binary segmentations/labels.

Cite As

adhusch (2021). STAPLE(D) (https://www.mathworks.com/matlabcentral/fileexchange/56789-staple-d), MATLAB Central File Exchange. Retrieved .

Comments and Ratings (3)

adhusch

@RUI XIA: As STAPLE is based on an i.i.d. assumption, you could simple "reshape" your 3D data as it is done in for the 2D example too: D = [s1(:), s2(:), s3(:), s4(:), s5(:)]; is putting segmentations from five different raters (s1 to s5) into one "voxel x rater" matrix D, which is the input for STAPLE. This will work equivalently for s1 to s5 being 3D.

RUI XIA

Sir, how to use it for 3D labels

jsh123

DF DFFEWR

MATLAB Release Compatibility
Created with R2013b
Compatible with any release
Platform Compatibility
Windows macOS Linux

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